A Bitter Taste on the Tongue
By Jane Morrimer
Summary: A punishment
*NC17*

Absalom
By Joyce McKibben
Summary: A conspiracy within the Conspiracy is revealed and Fox Mulder is at the heart of it.

Anamorphosis
by Megan Reilly
Summary: Assigned to find a horrifying serial murderer, Agent Scully discovers things about herself and her past that she never suspected.
Warning: This story contains adult material including sexuality, child abuse, and murder.  Sensitive readers may want to be on the lookout to skip parts that may be offensive.  Things do get graphic.

And You Risk a Crusade
By 25, Saelen
Summary:  Melissa Scully's quest is not to risk a crusade, but to ensure it.  The ends must justify the means.

Angelis
By Cici Lean
Summary:  Scully leaves the X-Files and returns. Mulder makes some serious sacrifices for Scully.

Another Such Victory
By Pellinor
Summary: Three years on, Scully lets herself remember Mulder's  greatest victory....  and his greatest betrayal. Is it too late  for reparation?

Any means necessary
By Ophelia
Summary: Mulder suffers a brutal sexual attack, which unexpectedly puts him and the Consortium on the same side.

Bars on the windows
By Gemma Kingsley
Summary: On the wrong side of the law, Mulder and Scully must prove their innocence while racing against time  and the people who want them out of the way for good.

Bargains
By Amperage
Summary: Part One: The result of Mulder's deal with the shadow conspiracy for a cure for Scully's cancer. Part Two: the effects of Scully's cancer on her mental equilibrium.

Best loved
By Dean Warner
Summary: Mulder's strange, violent behavior is causing all those he trusts to turn against him-- including Scully?

Betrayal
By Laura Anne Gilman
Summary: The title says all.
*NC17*

Betrayal in the garden
By J. Ackerson
Summary Part I: A "what if"/alternate story line ending for the fourth season finale - Scully wakes up disoriented next to a 'body'.
Part II: Continuation of a "what if"/alternate story line ending for the fourth season finale.
Part III: Romantic continuation of a "what if"/alternate story line ending for the fourth season finale

Beyond the grave
By IWant2Blieve
Summary: Mulder is possessed by a vengeful crime victim's ghost while solving the case.

Beyond the pale
Dawn McGlothin
Summary: The Syndicate have a plan to destroy Mulder by using against him what he holds most valuable--Scully. Just before "The End"; language, violence, some ActionScully, and double helpings of Mulderangst.

Blood of angels
By LoneGunGuy
Summary: As Scully lies on the sidewalk, dead, Mulder holds the murder weapon in his hands and knows that he must have had a damned good reason for killing her... if only he could remember what it was... A bizarre, labyrinthine mystery with darkly comic overtones.
Part 2 - Part 3 - Part 4

Bodhisattva
By Ophelia
Summary: Skinner's in the hospital, Mulder's in jail, and the mysterious old woman from "Avatar" is back.  Is she here to save or damn them?

Colonization
By Megan Reilly
Summary: What had happened after the Colonization with Mulder and Scully?

Commitment
By Jessica Archibald
Summary: After Mulder's bizarre behavior endangers her life, Scully turns to the Lone Gunmen for help. Their joint effort uncovers a startling truth and a dangerous government operation.
Part 2 | Part 3

Daemonium- The Possession
By Kinados
Summary: Scully must to deal with a real demon.

Dar moments
By Labilia
Summary: Following on from the scene in Grotesque where Mulder and Scully are standing on the roof top in front of Patterson's body.  Mulder's involvement with the case has a side effect that results in both Mulder and Scully being hurt.

Destiny
By Samantha Lin
Summary: Krycek reveals a different agenda and so does Mulder.
Take the other parts:  2 | 3 | 4 | 5 | 6 | 7 | 8 | 9

Double jeopardy
By Tiffany Dickinson
Summary: Scully's life is threatened when Mulder exhibits some unusual behavior

Duplicity
By Dawson E. Rambo
Summary:  Basically, it turns out that Mulder is right to be paranoid: EVERYONE is out to get him. In this story, Scully admits that she had been sent to spy on him, and all her alleged allegencies were nothing but tradecraft designed to win his trust. How Mulder reacts is the point of this story.

Elixir
By Rebecca Rusnak
Summary: Posing as a married couple for an undercover assignment holds more than one kind of danger for Mulder and Scully.
Part 2 Summary: While attempting to discover what has infected Scully, and old 'friend' re-appears. Features Deep Throat and The Cigarette Smoking Man.
Part 3 Summary: Scully is on the run, and Mulder must find her before anyone else does.

End, The
By Erica Miszti
Summary: Mulder gets fed up with the constant false trails and makes a decision which sets up a series of events that leads to the closure of the X Files and his own death, but may just be the only way to find the truth.
(Note: I am archiving this story here, but I didn`t read it yet. So, maybe, it`s not a badguy story)

Erosion
By Annie Sewell-Jennings
Summary: After being terribly defeated by the enemy, Mulder and Scully struggle to beat the game.
*NC17*

Eyes of the World
By Ava Cassavantes
Summary: Scully must deal with the ramifications of Mulder's new alliance with the Consortium.
*The story is unfinished*
 
 

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